Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.93■■□□□ 1.26
CHL1O00533 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.93■■□□□ 1.26
CHL1O00533 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
CHL1O00533 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CHL1O00533 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.93■■□□□ 1.26
CHL1O00533 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
CHL1O00533 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
CHL1O00533 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.93■■□□□ 1.26
CHL1O00533 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHL1O00533 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.92■■□□□ 1.26
CHL1O00533 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 SLC25A6P5-201ENST00000435663 894 ntBASIC22.92■■□□□ 1.26
CHL1O00533 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.92■■□□□ 1.26
CHL1O00533 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.92■■□□□ 1.26
CHL1O00533 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CHL1O00533 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CHL1O00533 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
CHL1O00533 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHL1O00533 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CHL1O00533 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.91■■□□□ 1.26
CHL1O00533 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CHL1O00533 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CHL1O00533 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.91■■□□□ 1.26
CHL1O00533 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 FAM197Y8-203ENST00000450145 560 ntBASIC22.91■■□□□ 1.26
CHL1O00533 SART3-203ENST00000546611 1184 ntBASIC22.91■■□□□ 1.26
CHL1O00533 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.91■■□□□ 1.26
CHL1O00533 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.91■■□□□ 1.26
CHL1O00533 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 AC073592.4-201ENST00000623827 446 ntBASIC22.91■■□□□ 1.26
CHL1O00533 AC148477.8-201ENST00000624298 468 ntBASIC22.91■■□□□ 1.26
CHL1O00533 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.91■■□□□ 1.26
CHL1O00533 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.91■■□□□ 1.26
CHL1O00533 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHL1O00533 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
CHL1O00533 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHL1O00533 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 AC006116.8-202ENST00000587620 1550 ntBASIC22.9■■□□□ 1.26
CHL1O00533 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHL1O00533 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
CHL1O00533 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHL1O00533 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.9■■□□□ 1.26
CHL1O00533 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHL1O00533 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.9■■□□□ 1.26
CHL1O00533 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHL1O00533 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CHL1O00533 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.9■■□□□ 1.26
CHL1O00533 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.9■■□□□ 1.26
CHL1O00533 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.9■■□□□ 1.26
CHL1O00533 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHL1O00533 AC132938.5-201ENST00000624980 1813 ntBASIC22.89■■□□□ 1.26
CHL1O00533 HLA-A-201ENST00000376802 1334 ntBASIC22.89■■□□□ 1.26
CHL1O00533 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHL1O00533 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHL1O00533 REXO1L11P-201ENST00000620964 1927 ntBASIC22.89■■□□□ 1.25
CHL1O00533 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.89■■□□□ 1.25
CHL1O00533 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.89■■□□□ 1.25
CHL1O00533 AC018712.1-201ENST00000455767 687 ntBASIC22.89■■□□□ 1.25
CHL1O00533 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.89■■□□□ 1.25
CHL1O00533 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.89■■□□□ 1.25
CHL1O00533 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHL1O00533 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.89■■□□□ 1.25
CHL1O00533 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHL1O00533 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.89■■□□□ 1.25
CHL1O00533 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.89■■□□□ 1.25
CHL1O00533 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHL1O00533 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.89■■□□□ 1.25
CHL1O00533 AC079776.2-201ENST00000641154 1609 ntBASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms