Protein–RNA interactions for Protein: O00255

MEN1, Menin, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1O00255 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.06■□□□□ 0.32
MEN1O00255 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.06■□□□□ 0.32
MEN1O00255 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.06■□□□□ 0.32
MEN1O00255 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MEN1O00255 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.06■□□□□ 0.32
MEN1O00255 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.06■□□□□ 0.32
MEN1O00255 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
MEN1O00255 AC114341.1-201ENST00000618070 349 ntBASIC17.06■□□□□ 0.32
MEN1O00255 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 AC008894.3-201ENST00000624324 3103 ntBASIC17.06■□□□□ 0.32
MEN1O00255 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 AC011270.2-201ENST00000624293 2550 ntBASIC17.06■□□□□ 0.32
MEN1O00255 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.06■□□□□ 0.32
MEN1O00255 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MEN1O00255 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.06■□□□□ 0.32
MEN1O00255 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MEN1O00255 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 KRT18P65-201ENST00000439811 1286 ntBASIC17.05■□□□□ 0.32
MEN1O00255 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MEN1O00255 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 AC005336.2-201ENST00000593183 939 ntBASIC17.05■□□□□ 0.32
MEN1O00255 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 GMCL1P1-201ENST00000463439 1581 ntBASIC17.05■□□□□ 0.32
MEN1O00255 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.05■□□□□ 0.32
MEN1O00255 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
MEN1O00255 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
MEN1O00255 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MEN1O00255 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.04■□□□□ 0.32
MEN1O00255 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.04■□□□□ 0.32
MEN1O00255 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.04■□□□□ 0.32
MEN1O00255 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.04■□□□□ 0.32
MEN1O00255 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 AF238378.1-201ENST00000526806 358 ntBASIC17.04■□□□□ 0.32
MEN1O00255 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 TP73-AS1-210ENST00000637775 1455 ntBASIC17.04■□□□□ 0.32
MEN1O00255 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.04■□□□□ 0.32
MEN1O00255 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MEN1O00255 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MEN1O00255 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MEN1O00255 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MEN1O00255 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.03■□□□□ 0.32
MEN1O00255 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MEN1O00255 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms