Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 AC104692.2-201ENST00000603054 253 ntBASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 POM121L3P-201ENST00000419331 1163 ntBASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AC096582.2-201ENST00000510860 516 ntBASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 AL121912.1-201ENST00000603683 238 ntBASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA3F8WFD2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 LINC00602-201ENST00000629776 2065 ntBASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA3F8WFD2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 AC135776.1-201ENST00000319817 2481 ntBASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA3F8WFD2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms