Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 FAM215A-202ENST00000632077 792 ntBASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AC243591.1-201ENST00000452967 1364 ntBASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 AC004408.2-201ENST00000623613 2777 ntBASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 RPS2P1-201ENST00000434010 821 ntBASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3FA6NER0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TBC1D3FA6NER0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3FA6NER0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.77■□□□□ 0.43
TBC1D3FA6NER0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3FA6NER0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 AC096633.1-201ENST00000422446 749 ntBASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MIR7706-201ENST00000613747 67 ntBASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TBC1D3FA6NER0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TBC1D3FA6NER0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms