Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 CCR12P-201ENST00000446203 998 ntBASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 AC026471.5-201ENST00000615068 467 ntBASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 AL023803.3-201ENST00000615559 522 ntBASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GOLGA6L4A6NEF3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 AL158047.1-201ENST00000445918 881 ntBASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 AC233702.5-201ENST00000584107 538 ntBASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GOLGA6L4A6NEF3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 BX088651.1-201ENST00000540551 451 ntBASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.65■□□□□ 0.9
GOLGA6L4A6NEF3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
GOLGA6L4A6NEF3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GOLGA6L4A6NEF3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
GOLGA6L4A6NEF3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 DUTP2-201ENST00000519164 463 ntBASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GOLGA6L4A6NEF3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms