Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 NME2P1-201ENST00000426182 414 ntBASIC18.54■□□□□ 0.56
XIRP2A4UGR9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.54■□□□□ 0.56
XIRP2A4UGR9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 CRYGEP-201ENST00000412192 528 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 AC004790.2-201ENST00000623588 572 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 TSPY16P-201ENST00000449843 468 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 AC008687.5-201ENST00000593746 558 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 AC025048.6-201ENST00000634326 1161 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 KRT18P65-201ENST00000439811 1286 ntBASIC18.53■□□□□ 0.56
XIRP2A4UGR9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
XIRP2A4UGR9 AL161938.1-201ENST00000569833 2180 ntBASIC18.52■□□□□ 0.56
XIRP2A4UGR9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 FAM58DP-201ENST00000428076 619 ntBASIC18.52■□□□□ 0.56
XIRP2A4UGR9 FAM207CP-201ENST00000443486 507 ntBASIC18.52■□□□□ 0.56
XIRP2A4UGR9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 NCF1C-201ENST00000438382 1427 ntBASIC18.52■□□□□ 0.56
XIRP2A4UGR9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
XIRP2A4UGR9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
XIRP2A4UGR9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 ARSEP1-201ENST00000420443 635 ntBASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AC055876.3-201ENST00000431496 288 ntBASIC18.51■□□□□ 0.55
XIRP2A4UGR9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.51■□□□□ 0.55
XIRP2A4UGR9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 AC138649.4-201ENST00000612222 287 ntBASIC18.51■□□□□ 0.55
XIRP2A4UGR9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
XIRP2A4UGR9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
XIRP2A4UGR9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms