Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 AC140113.2-201ENST00000604370 208 ntBASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC144AA2RUR9 AC087289.5-201ENST00000586076 3175 ntBASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 PGAM5P1-201ENST00000518923 814 ntBASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 AC004408.2-201ENST00000623613 2777 ntBASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 AL020996.1-203ENST00000536896 2307 ntBASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC144AA2RUR9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 ELK2BP-201ENST00000415014 1224 ntBASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 MED15P5-201ENST00000423150 992 ntBASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 UNC93B6-202ENST00000528242 690 ntBASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 AC009113.1-201ENST00000570267 2443 ntBASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 FLJ13224-201ENST00000313737 1514 ntBASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC144AA2RUR9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 TERC-201ENST00000602385 541 ntBASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 AL589182.2-201ENST00000619332 1049 ntBASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 AC109462.3-201ENST00000573934 613 ntBASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 STK25P1-201ENST00000585406 838 ntBASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 FAM197Y3-203ENST00000618346 717 ntBASIC25.54■■□□□ 1.68
CCDC144AA2RUR9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms