Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC196A0A1B0GTZ2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 DDX43P3-201ENST00000441064 443 ntBASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 TSSC2-201ENST00000450217 709 ntBASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC011840.4-201ENST00000578471 627 ntBASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC196A0A1B0GTZ2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 AL133373.2-201ENST00000623187 2828 ntBASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC196A0A1B0GTZ2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC246785.2-201ENST00000432512 513 ntBASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC134043.2-201ENST00000624206 2238 ntBASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC196A0A1B0GTZ2 AC097374.2-201ENST00000618617 1306 ntBASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 VENTXP7-201ENST00000475503 772 ntBASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC196A0A1B0GTZ2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms