Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP4B1Q9Y6B7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 KRT8P11-201ENST00000409686 1436 ntBASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP4B1Q9Y6B7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4B1Q9Y6B7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AC211429.1-201ENST00000415277 523 ntBASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 TSPY23P-201ENST00000440136 739 ntBASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 LINC01023-201ENST00000606054 436 ntBASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4B1Q9Y6B7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP4B1Q9Y6B7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP4B1Q9Y6B7 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.34
AP4B1Q9Y6B7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
AP4B1Q9Y6B7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4B1Q9Y6B7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP4B1Q9Y6B7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms