Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 AL035633.1-201ENST00000406139 838 ntBASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 STK19B-204ENST00000512515 211 ntBASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 AC068137.2-201ENST00000605408 478 ntBASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 AC093028.1-201ENST00000622998 982 ntBASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 PC-208ENST00000529047 1607 ntTSL 3 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 AC092902.6-201ENST00000641783 218 ntBASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPBQ9Y5S2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 AL353135.1-201ENST00000606729 504 ntBASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 ACTG1P4-201ENST00000425123 1122 ntBASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPBQ9Y5S2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 FAM58CP-201ENST00000435741 640 ntBASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 DDX43P3-201ENST00000441064 443 ntBASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 SIGLEC30P-201ENST00000455569 941 ntBASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC26.81■■□□□ 1.88
CDC42BPBQ9Y5S2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 AL096828.2-201ENST00000567259 1965 ntBASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 AC106028.4-201ENST00000614509 607 ntBASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPBQ9Y5S2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPBQ9Y5S2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms