Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA11Q9Y5H2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 PCDHA12-202ENST00000613593 2588 ntBASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 AC117947.1-201ENST00000427448 529 ntBASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 HOMER2P1-201ENST00000455653 964 ntBASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 LINC00167-201ENST00000530583 1419 ntBASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA11Q9Y5H2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 RNF152P1-201ENST00000397754 604 ntBASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 TSPY5P-201ENST00000426936 936 ntBASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AC079602.3-201ENST00000623931 403 ntBASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AC012317.2-201ENST00000623305 2251 ntBASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA11Q9Y5H2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AL645608.8-201ENST00000606034 2086 ntBASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms