Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RPS2P28-201ENST00000314255 741 ntBASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RCN1P2-201ENST00000398357 915 ntBASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 AC009102.3-201ENST00000623118 1491 ntBASIC16.73■□□□□ 0.27
PCDHGA9Q9Y5G4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 FGFR3P6-201ENST00000457012 610 ntBASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AIRN-201ENST00000601203 4374 ntBASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AC243591.1-201ENST00000452967 1364 ntBASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA9Q9Y5G4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 PMS2P7-201ENST00000506558 1336 ntBASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 AC005336.2-201ENST00000593183 939 ntBASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 MIR7706-201ENST00000613747 67 ntBASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA9Q9Y5G4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms