Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 NEK4P2-201ENST00000580004 1012 ntBASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.71■□□□□ 0.1
RHBDD3Q9Y3P4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 KRT18P55-202ENST00000578578 1546 ntBASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 LINC01126-201ENST00000623515 1646 ntBASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHBDD3Q9Y3P4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHBDD3Q9Y3P4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms