Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 AL157888.1-201ENST00000631930 593 ntBASIC21.05■□□□□ 0.96
SMC3Q9UQE7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 LINC00602-201ENST00000629776 2065 ntBASIC21.05■□□□□ 0.96
SMC3Q9UQE7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMC3Q9UQE7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 PVRIG2P-201ENST00000435460 978 ntBASIC21.04■□□□□ 0.96
SMC3Q9UQE7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 AC080080.1-201ENST00000625121 2420 ntBASIC21.04■□□□□ 0.96
SMC3Q9UQE7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.04■□□□□ 0.96
SMC3Q9UQE7 AL023806.1-201ENST00000603994 1649 ntBASIC21.04■□□□□ 0.96
SMC3Q9UQE7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 AC133963.1-201ENST00000504166 1679 ntBASIC21.03■□□□□ 0.96
SMC3Q9UQE7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMC3Q9UQE7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMC3Q9UQE7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms