Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 AC113404.2-201ENST00000507884 177 ntBASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 AC096582.2-201ENST00000510860 516 ntBASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDAC6Q9UBN7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 SDHAP2-201ENST00000455183 2001 ntBASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 RNA5SP419-201ENST00000515908 135 ntBASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 AC120114.3-201ENST00000611923 658 ntBASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HDAC6Q9UBN7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 AL590627.1-203ENST00000421194 1026 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 FAM197Y8-203ENST00000450145 560 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 BX640515.1-201ENST00000617215 977 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 AC114341.1-201ENST00000618070 349 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 AC023511.2-201ENST00000618803 211 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms