Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL049757.1-201ENST00000616842 1596 ntBASIC20.18■□□□□ 0.82
COL20A1Q9P218 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 AC139887.3-201ENST00000568585 713 ntBASIC20.18■□□□□ 0.82
COL20A1Q9P218 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.18■□□□□ 0.82
COL20A1Q9P218 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 MTDHP4-201ENST00000600287 670 ntBASIC20.17■□□□□ 0.82
COL20A1Q9P218 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 AC073592.4-201ENST00000623827 446 ntBASIC20.17■□□□□ 0.82
COL20A1Q9P218 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL20A1Q9P218 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL20A1Q9P218 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 AC019129.2-201ENST00000609837 1235 ntBASIC20.16■□□□□ 0.82
COL20A1Q9P218 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL20A1Q9P218 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL20A1Q9P218 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 MIR574-201ENST00000385209 96 ntBASIC20.15■□□□□ 0.82
COL20A1Q9P218 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
COL20A1Q9P218 AC132938.5-201ENST00000624980 1813 ntBASIC20.15■□□□□ 0.82
COL20A1Q9P218 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL20A1Q9P218 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms