Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 C2orf69P3-201ENST00000565542 1120 ntBASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 CYP2D8P-201ENST00000433633 1490 ntBASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 NEK4P2-201ENST00000580004 1012 ntBASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 AL157888.1-201ENST00000631930 593 ntBASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC52A3Q9NQ40 AC060834.1-201ENST00000443027 2032 ntBASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 LYSMD4-203ENST00000378904 2122 ntBASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 KRT18P65-201ENST00000439811 1286 ntBASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC52A3Q9NQ40 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 KRT8P9-201ENST00000558927 1449 ntBASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 AC016396.2-201ENST00000562575 1417 ntBASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms