Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3AQ9NNX9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VCX3AQ9NNX9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCX3AQ9NNX9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.76■□□□□ 0.27
VCX3AQ9NNX9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AC124283.5-201ENST00000624661 1809 ntBASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AL096828.2-201ENST00000567259 1965 ntBASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AL390719.1-204ENST00000412397 1219 ntBASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 LINC02228-204ENST00000642115 2962 ntBASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCX3AQ9NNX9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 NORAD-201ENST00000565493 5339 ntBASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 TCAF2P1-201ENST00000291129 2421 ntBASIC16.74■□□□□ 0.27
VCX3AQ9NNX9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VCX3AQ9NNX9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms