Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AL121912.1-201ENST00000603683 238 ntBASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AL031008.1-201ENST00000619963 541 ntBASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AC079781.3-201ENST00000449110 356 ntBASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 AL355877.3-201ENST00000622820 899 ntBASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G1Q9HCP0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 AL049757.1-201ENST00000616842 1596 ntBASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G1Q9HCP0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.58
CSNK1G1Q9HCP0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 AL160237.2-201ENST00000556165 472 ntBASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 AC019129.2-201ENST00000609837 1235 ntBASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G1Q9HCP0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms