Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 REXO1L9P-201ENST00000604264 2108 ntBASIC15.67■□□□□ 0.1
CDH20Q9HBT6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 GUSBP12-201ENST00000513727 720 ntBASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.67■□□□□ 0.1
CDH20Q9HBT6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 BICD1-207ENST00000551848 1962 ntBASIC15.67■□□□□ 0.1
CDH20Q9HBT6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 AC022898.2-201ENST00000616822 1312 ntBASIC15.67■□□□□ 0.1
CDH20Q9HBT6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH20Q9HBT6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 NFIC-211ENST00000641145 8399 ntBASIC15.66■□□□□ 0.1
CDH20Q9HBT6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 KRT8P26-201ENST00000534154 1276 ntBASIC15.66■□□□□ 0.1
CDH20Q9HBT6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.66■□□□□ 0.1
CDH20Q9HBT6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 LINC00167-201ENST00000530583 1419 ntBASIC15.66■□□□□ 0.1
CDH20Q9HBT6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH20Q9HBT6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH20Q9HBT6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms