Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AP002414.3-201ENST00000589352 1468 ntBASIC20.81■□□□□ 0.92
EFCC1Q9HA90 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EFCC1Q9HA90 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.81■□□□□ 0.92
EFCC1Q9HA90 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AC008687.5-201ENST00000593746 558 ntBASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EFCC1Q9HA90 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.79■□□□□ 0.92
EFCC1Q9HA90 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 MTCL1P1-201ENST00000446207 792 ntBASIC20.79■□□□□ 0.92
EFCC1Q9HA90 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 AL139288.1-201ENST00000623748 933 ntBASIC20.79■□□□□ 0.92
EFCC1Q9HA90 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 AC107918.4-202ENST00000641623 219 ntBASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
EFCC1Q9HA90 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AC009947.1-201ENST00000444350 727 ntBASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AC005829.1-201ENST00000570002 483 ntBASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AC239800.4-201ENST00000603712 296 ntBASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AL138831.2-201ENST00000606564 490 ntBASIC20.78■□□□□ 0.92
EFCC1Q9HA90 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.78■□□□□ 0.92
EFCC1Q9HA90 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms