Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 Z69720.1-201ENST00000601483 472 ntBASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 AL109659.2-201ENST00000606809 1674 ntBASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 HOXB1-202ENST00000577092 1414 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AC141586.3-201ENST00000562166 1838 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AP000593.1-201ENST00000393668 712 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 KRT16P4-201ENST00000453883 522 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AC099336.1-202ENST00000602961 463 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AL390719.2-201ENST00000606993 987 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 AC233702.3-201ENST00000578656 1387 ntBASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR1BQ9H9Y6 LINC00167-201ENST00000530583 1419 ntBASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 TEX21P-204ENST00000641479 1693 ntBASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR1BQ9H9Y6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ABALON-201ENST00000629058 1903 ntBASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms