Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 AC120114.3-201ENST00000611923 658 ntBASIC21.22■□□□□ 0.99
NBPF3Q9H094 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 BX640515.1-201ENST00000617215 977 ntBASIC21.22■□□□□ 0.99
NBPF3Q9H094 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF3Q9H094 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
NBPF3Q9H094 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 KRT18P13-201ENST00000400056 1290 ntBASIC21.21■□□□□ 0.99
NBPF3Q9H094 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 AL671883.3-201ENST00000603274 991 ntBASIC21.21■□□□□ 0.99
NBPF3Q9H094 AL121912.1-201ENST00000603683 238 ntBASIC21.21■□□□□ 0.99
NBPF3Q9H094 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF3Q9H094 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NBPF3Q9H094 AC125634.1-201ENST00000438758 1403 ntBASIC21.21■□□□□ 0.99
NBPF3Q9H094 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.2■□□□□ 0.99
NBPF3Q9H094 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.2■□□□□ 0.99
NBPF3Q9H094 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 NSUN5P1-202ENST00000421140 1535 ntBASIC21.2■□□□□ 0.98
NBPF3Q9H094 NSUN5P2-203ENST00000457352 1529 ntBASIC21.2■□□□□ 0.98
NBPF3Q9H094 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 MRPL3P1-201ENST00000400109 1033 ntBASIC21.2■□□□□ 0.98
NBPF3Q9H094 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 AC011840.4-201ENST00000578471 627 ntBASIC21.2■□□□□ 0.98
NBPF3Q9H094 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 BNIP3P18-201ENST00000593976 575 ntBASIC21.2■□□□□ 0.98
NBPF3Q9H094 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
NBPF3Q9H094 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF3Q9H094 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.19■□□□□ 0.98
NBPF3Q9H094 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 AC009949.1-201ENST00000623048 1830 ntBASIC21.19■□□□□ 0.98
NBPF3Q9H094 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 AC010460.3-201ENST00000511359 1579 ntBASIC21.19■□□□□ 0.98
NBPF3Q9H094 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF3Q9H094 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms