Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 RALB-208ENST00000631312 311 ntTSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LCE3DQ9BYE3 AC011270.2-201ENST00000624293 2550 ntBASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
LCE3DQ9BYE3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KRT17P1-201ENST00000399211 1546 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KRT18P55-202ENST00000578578 1546 ntBASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LCE3DQ9BYE3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms