Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 KRT18P65-201ENST00000439811 1286 ntBASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BPIFA3Q9BQP9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 TSPY14P-201ENST00000303979 915 ntBASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AC098590.1-201ENST00000468126 897 ntBASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AC106886.4-201ENST00000623557 2502 ntBASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
BPIFA3Q9BQP9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 AC005104.2-201ENST00000427818 678 ntBASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 AP000525.1-201ENST00000608286 694 ntBASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 AC092865.7-201ENST00000641832 219 ntBASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BPIFA3Q9BQP9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
BPIFA3Q9BQP9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
BPIFA3Q9BQP9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
BPIFA3Q9BQP9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
BPIFA3Q9BQP9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
BPIFA3Q9BQP9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 GCSHP5-201ENST00000443090 522 ntBASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 C2orf69P3-201ENST00000565542 1120 ntBASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 NEK4P2-201ENST00000580004 1012 ntBASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BPIFA3Q9BQP9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms