Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 PTCHD3P3-201ENST00000403073 906 ntBASIC20.4■□□□□ 0.86
PTPN18Q99952 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN18Q99952 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN18Q99952 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN18Q99952 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN18Q99952 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
PTPN18Q99952 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN18Q99952 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.39■□□□□ 0.86
PTPN18Q99952 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN18Q99952 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN18Q99952 AC092474.2-201ENST00000424288 719 ntBASIC20.39■□□□□ 0.85
PTPN18Q99952 SIGLEC30P-201ENST00000455569 941 ntBASIC20.39■□□□□ 0.85
PTPN18Q99952 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN18Q99952 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPN18Q99952 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN18Q99952 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN18Q99952 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPN18Q99952 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN18Q99952 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN18Q99952 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN18Q99952 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.38■□□□□ 0.85
PTPN18Q99952 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN18Q99952 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PTPN18Q99952 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN18Q99952 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN18Q99952 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PTPN18Q99952 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN18Q99952 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN18Q99952 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PTPN18Q99952 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.37■□□□□ 0.85
PTPN18Q99952 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.37■□□□□ 0.85
PTPN18Q99952 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN18Q99952 MIR4745-201ENST00000577608 62 ntBASIC20.37■□□□□ 0.85
PTPN18Q99952 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN18Q99952 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN18Q99952 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN18Q99952 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN18Q99952 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PTPN18Q99952 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN18Q99952 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN18Q99952 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN18Q99952 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.36■□□□□ 0.85
PTPN18Q99952 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.36■□□□□ 0.85
PTPN18Q99952 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.36■□□□□ 0.85
PTPN18Q99952 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN18Q99952 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN18Q99952 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN18Q99952 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN18Q99952 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.36■□□□□ 0.85
PTPN18Q99952 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN18Q99952 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN18Q99952 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms