Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NPAS2Q99743 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS2Q99743 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS2Q99743 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS2Q99743 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS2Q99743 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS2Q99743 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS2Q99743 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS2Q99743 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS2Q99743 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPAS2Q99743 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NPAS2Q99743 YBX1P2-201ENST00000489612 999 ntBASIC17.54■□□□□ 0.4
NPAS2Q99743 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS2Q99743 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS2Q99743 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.54■□□□□ 0.4
NPAS2Q99743 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS2Q99743 AC008622.2-201ENST00000617006 1229 ntBASIC17.54■□□□□ 0.4
NPAS2Q99743 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.54■□□□□ 0.4
NPAS2Q99743 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPAS2Q99743 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.54■□□□□ 0.4
NPAS2Q99743 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NPAS2Q99743 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 TNRC18P3-201ENST00000441896 2691 ntBASIC17.54■□□□□ 0.4
NPAS2Q99743 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPAS2Q99743 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
NPAS2Q99743 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS2Q99743 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS2Q99743 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.53■□□□□ 0.4
NPAS2Q99743 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPAS2Q99743 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.53■□□□□ 0.4
NPAS2Q99743 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPAS2Q99743 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
NPAS2Q99743 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms