Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.53■□□□□ 0.08
COL12A1Q99715 KLF2P3-201ENST00000451977 1087 ntBASIC15.53■□□□□ 0.08
COL12A1Q99715 GPR53P-205ENST00000457298 1084 ntBASIC15.53■□□□□ 0.08
COL12A1Q99715 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.53■□□□□ 0.08
COL12A1Q99715 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.53■□□□□ 0.08
COL12A1Q99715 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.53■□□□□ 0.08
COL12A1Q99715 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.53■□□□□ 0.08
COL12A1Q99715 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COL12A1Q99715 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.53■□□□□ 0.08
COL12A1Q99715 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 AC079776.1-201ENST00000401540 1152 ntBASIC15.53■□□□□ 0.08
COL12A1Q99715 PIN1P1-201ENST00000412108 996 ntBASIC15.53■□□□□ 0.08
COL12A1Q99715 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.53■□□□□ 0.08
COL12A1Q99715 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.53■□□□□ 0.08
COL12A1Q99715 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.53■□□□□ 0.08
COL12A1Q99715 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.53■□□□□ 0.08
COL12A1Q99715 IGHV3-72-202ENST00000621503 303 ntBASIC15.53■□□□□ 0.08
COL12A1Q99715 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL12A1Q99715 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.52■□□□□ 0.08
COL12A1Q99715 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
COL12A1Q99715 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
COL12A1Q99715 AC112698.1-201ENST00000510299 916 ntBASIC15.52■□□□□ 0.08
COL12A1Q99715 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.52■□□□□ 0.08
COL12A1Q99715 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
COL12A1Q99715 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.52■□□□□ 0.08
COL12A1Q99715 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.52■□□□□ 0.08
COL12A1Q99715 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.52■□□□□ 0.08
COL12A1Q99715 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
COL12A1Q99715 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.52■□□□□ 0.08
COL12A1Q99715 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 AC067863.1-201ENST00000494933 530 ntBASIC15.52■□□□□ 0.08
COL12A1Q99715 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL12A1Q99715 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.52■□□□□ 0.08
COL12A1Q99715 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.52■□□□□ 0.08
COL12A1Q99715 GPR182-203ENST00000622922 591 ntBASIC15.52■□□□□ 0.08
COL12A1Q99715 PGM5P2-202ENST00000637225 1043 ntBASIC15.52■□□□□ 0.08
COL12A1Q99715 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.52■□□□□ 0.07
COL12A1Q99715 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
COL12A1Q99715 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.52■□□□□ 0.07
COL12A1Q99715 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
COL12A1Q99715 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.52■□□□□ 0.07
COL12A1Q99715 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.52■□□□□ 0.07
COL12A1Q99715 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.52■□□□□ 0.07
COL12A1Q99715 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL12A1Q99715 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL12A1Q99715 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.51■□□□□ 0.07
COL12A1Q99715 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.51■□□□□ 0.07
COL12A1Q99715 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.51■□□□□ 0.07
COL12A1Q99715 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
COL12A1Q99715 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.51■□□□□ 0.07
COL12A1Q99715 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 AL353135.1-201ENST00000606729 504 ntBASIC15.51■□□□□ 0.07
COL12A1Q99715 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 GNAS-203ENST00000306120 1878 ntBASIC15.51■□□□□ 0.07
COL12A1Q99715 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 GABARAPL3-202ENST00000624044 1851 ntBASIC15.51■□□□□ 0.07
COL12A1Q99715 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 KRT8P47-201ENST00000604727 1398 ntBASIC15.51■□□□□ 0.07
COL12A1Q99715 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.51■□□□□ 0.07
COL12A1Q99715 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COL12A1Q99715 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.51■□□□□ 0.07
COL12A1Q99715 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.51■□□□□ 0.07
COL12A1Q99715 AP001059.3-201ENST00000619053 235 ntBASIC15.51■□□□□ 0.07
COL12A1Q99715 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL12A1Q99715 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.51■□□□□ 0.07
COL12A1Q99715 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL12A1Q99715 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms