Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCL13Q99616 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 AC068472.1-201ENST00000474589 881 ntBASIC15.01□□□□□ -0.01
CCL13Q99616 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL13Q99616 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.01□□□□□ -0.01
CCL13Q99616 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL13Q99616 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCL13Q99616 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCL13Q99616 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL13Q99616 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 MTCL1P1-201ENST00000446207 792 ntBASIC15□□□□□ -0.01
CCL13Q99616 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 RN7SL606P-201ENST00000472779 293 ntBASIC15□□□□□ -0.01
CCL13Q99616 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15□□□□□ -0.01
CCL13Q99616 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCL13Q99616 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL13Q99616 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCL13Q99616 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL13Q99616 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCL13Q99616 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms