Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 AC002310.6-201ENST00000624451 1377 ntBASIC19.15■□□□□ 0.66
YME1L1Q96TA2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 AC005332.7-201ENST00000614046 2005 ntBASIC19.15■□□□□ 0.66
YME1L1Q96TA2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.15■□□□□ 0.66
YME1L1Q96TA2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
YME1L1Q96TA2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.14■□□□□ 0.66
YME1L1Q96TA2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
YME1L1Q96TA2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
YME1L1Q96TA2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
YME1L1Q96TA2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
YME1L1Q96TA2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 CRYGEP-201ENST00000412192 528 ntBASIC19.14■□□□□ 0.65
YME1L1Q96TA2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 AL589182.2-201ENST00000619332 1049 ntBASIC19.14■□□□□ 0.65
YME1L1Q96TA2 AC073592.5-201ENST00000624854 528 ntBASIC19.14■□□□□ 0.65
YME1L1Q96TA2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YME1L1Q96TA2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 AC103564.2-201ENST00000432853 1299 ntBASIC19.13■□□□□ 0.65
YME1L1Q96TA2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 MIR4751-201ENST00000578027 74 ntBASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 MIR4469-201ENST00000583919 79 ntBASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
YME1L1Q96TA2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
YME1L1Q96TA2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YME1L1Q96TA2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
YME1L1Q96TA2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YME1L1Q96TA2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
YME1L1Q96TA2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms