Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 AC083849.1-201ENST00000615227 514 ntBASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 AL353692.3-201ENST00000407031 1396 ntBASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A4EQ96PG1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 AL671277.2-201ENST00000458060 996 ntBASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A4EQ96PG1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.71■□□□□ 0.27
MS4A4EQ96PG1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.71■□□□□ 0.26
MS4A4EQ96PG1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.71■□□□□ 0.26
MS4A4EQ96PG1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
MS4A4EQ96PG1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms