Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 LINC01451-201ENST00000623792 534 ntBASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AL157888.1-201ENST00000631930 593 ntBASIC12.99□□□□□ -0.33
C9orf85Q96MD7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
C9orf85Q96MD7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 DDX43P3-201ENST00000441064 443 ntBASIC12.98□□□□□ -0.33
C9orf85Q96MD7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
C9orf85Q96MD7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 AC009053.2-201ENST00000563701 2365 ntBASIC12.97□□□□□ -0.33
C9orf85Q96MD7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 MMP23A-201ENST00000234610 1017 ntBASIC12.97□□□□□ -0.33
C9orf85Q96MD7 ECEL1P3-201ENST00000427961 737 ntBASIC12.97□□□□□ -0.33
C9orf85Q96MD7 KRT18P65-201ENST00000439811 1286 ntBASIC12.97□□□□□ -0.33
C9orf85Q96MD7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.97□□□□□ -0.33
C9orf85Q96MD7 ECEL1P2-202ENST00000465689 757 ntBASIC12.97□□□□□ -0.33
C9orf85Q96MD7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms