Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 DUTP2-201ENST00000519164 463 ntBASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 AC024243.1-201ENST00000609234 778 ntBASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHAMP1Q96JM3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 AGGF1P2-201ENST00000426656 2106 ntBASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHAMP1Q96JM3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 MIR1238-201ENST00000408483 83 ntBASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHAMP1Q96JM3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 AL138688.1-201ENST00000624851 1594 ntBASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 KRT8P7-201ENST00000533003 1432 ntBASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms