Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 Z85996.1-201ENST00000494644 937 ntBASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 AC004264.1-201ENST00000608354 794 ntBASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 AC069544.1-201ENST00000609399 999 ntBASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP6Q96FZ7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP6Q96FZ7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 AL109659.2-201ENST00000606809 1674 ntBASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 AC239809.2-201ENST00000415381 517 ntBASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 AL023875.1-201ENST00000640777 796 ntBASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms