Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 AC013268.1-206ENST00000638368 961 ntBASIC20.29■□□□□ 0.84
TRIM44Q96DX7 AC112229.1-201ENST00000639295 961 ntBASIC20.29■□□□□ 0.84
TRIM44Q96DX7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM44Q96DX7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 AC004854.2-201ENST00000608450 1441 ntBASIC20.28■□□□□ 0.84
TRIM44Q96DX7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 AL355472.2-201ENST00000422958 438 ntBASIC20.28■□□□□ 0.84
TRIM44Q96DX7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 AC005052.1-201ENST00000625181 2492 ntBASIC20.28■□□□□ 0.84
TRIM44Q96DX7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM44Q96DX7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 EDA-201ENST00000338901 1233 ntBASIC20.27■□□□□ 0.84
TRIM44Q96DX7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.27■□□□□ 0.84
TRIM44Q96DX7 TUBB8P6-201ENST00000436895 1288 ntBASIC20.27■□□□□ 0.84
TRIM44Q96DX7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM44Q96DX7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM44Q96DX7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM44Q96DX7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM44Q96DX7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 MIR939-201ENST00000401314 82 ntBASIC20.26■□□□□ 0.83
TRIM44Q96DX7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 AF213884.3-201ENST00000563833 479 ntBASIC20.26■□□□□ 0.83
TRIM44Q96DX7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM44Q96DX7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms