Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 KLF4P1-201ENST00000412782 1185 ntBASIC17.78■□□□□ 0.44
CLDN23Q96B33 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 DUTP2-201ENST00000519164 463 ntBASIC17.78■□□□□ 0.44
CLDN23Q96B33 AC004449.1-201ENST00000564240 433 ntBASIC17.78■□□□□ 0.44
CLDN23Q96B33 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN23Q96B33 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN23Q96B33 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.78■□□□□ 0.44
CLDN23Q96B33 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 AC005082.1-201ENST00000413042 2259 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 AC093512.1-201ENST00000617969 520 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 AC007064.4-201ENST00000637740 555 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 AC025580.3-201ENST00000617932 1424 ntBASIC17.77■□□□□ 0.44
CLDN23Q96B33 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN23Q96B33 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN23Q96B33 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN23Q96B33 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN23Q96B33 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN23Q96B33 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CLDN23Q96B33 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 PTCHD3P3-201ENST00000403073 906 ntBASIC17.76■□□□□ 0.43
CLDN23Q96B33 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 AC091812.2-201ENST00000619081 385 ntBASIC17.76■□□□□ 0.43
CLDN23Q96B33 AC105339.1-204ENST00000636249 355 ntBASIC17.76■□□□□ 0.43
CLDN23Q96B33 AC092902.6-201ENST00000641783 218 ntBASIC17.76■□□□□ 0.43
CLDN23Q96B33 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN23Q96B33 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 ESPNP-201ENST00000270691 2015 ntBASIC17.76■□□□□ 0.43
CLDN23Q96B33 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN23Q96B33 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN23Q96B33 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN23Q96B33 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLDN23Q96B33 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN23Q96B33 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
CLDN23Q96B33 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLDN23Q96B33 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms