Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.41■□□□□ 0.38
NCLNQ969V3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLNQ969V3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
NCLNQ969V3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCLNQ969V3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
NCLNQ969V3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 RNF152P1-201ENST00000397754 604 ntBASIC17.4■□□□□ 0.38
NCLNQ969V3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.4■□□□□ 0.38
NCLNQ969V3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.4■□□□□ 0.38
NCLNQ969V3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.4■□□□□ 0.38
NCLNQ969V3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NCLNQ969V3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.4■□□□□ 0.38
NCLNQ969V3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLNQ969V3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.4■□□□□ 0.38
NCLNQ969V3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLNQ969V3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.39■□□□□ 0.38
NCLNQ969V3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCLNQ969V3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLNQ969V3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 TSPY5P-201ENST00000426936 936 ntBASIC17.39■□□□□ 0.37
NCLNQ969V3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 AL441883.1-201ENST00000566170 1045 ntBASIC17.39■□□□□ 0.37
NCLNQ969V3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.39■□□□□ 0.37
NCLNQ969V3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.39■□□□□ 0.37
NCLNQ969V3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
NCLNQ969V3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
NCLNQ969V3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLNQ969V3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.39■□□□□ 0.37
NCLNQ969V3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLNQ969V3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NCLNQ969V3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
NCLNQ969V3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCLNQ969V3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCLNQ969V3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.38■□□□□ 0.37
NCLNQ969V3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.38■□□□□ 0.37
NCLNQ969V3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.38■□□□□ 0.37
NCLNQ969V3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NCLNQ969V3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.38■□□□□ 0.37
NCLNQ969V3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCLNQ969V3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
NCLNQ969V3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLNQ969V3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
NCLNQ969V3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
NCLNQ969V3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms