Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 UNC93B7-201ENST00000509439 705 ntBASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AC106795.1-205ENST00000512851 1056 ntBASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AC091304.2-201ENST00000564639 760 ntBASIC16.14■□□□□ 0.17
RNF138Q8WVD3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RNF138Q8WVD3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.13■□□□□ 0.17
RNF138Q8WVD3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 ABCD1P5-201ENST00000445663 754 ntBASIC16.13■□□□□ 0.17
RNF138Q8WVD3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 KRT126P-201ENST00000549467 1181 ntBASIC16.13■□□□□ 0.17
RNF138Q8WVD3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.13■□□□□ 0.17
RNF138Q8WVD3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 AC012317.2-201ENST00000623305 2251 ntBASIC16.13■□□□□ 0.17
RNF138Q8WVD3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF138Q8WVD3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 AL450487.1-201ENST00000426799 995 ntBASIC16.12■□□□□ 0.17
RNF138Q8WVD3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 IFNL4P1-201ENST00000607083 540 ntBASIC16.12■□□□□ 0.17
RNF138Q8WVD3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
RNF138Q8WVD3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF138Q8WVD3 AC133963.1-201ENST00000504166 1679 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms