Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 COX5BP2-201ENST00000392354 334 ntBASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 MED15P5-201ENST00000423150 992 ntBASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 AC103564.2-201ENST00000432853 1299 ntBASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 AL356488.2-201ENST00000602755 427 ntBASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SH3TC1Q8TE82 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 MIR1233-2-201ENST00000408138 82 ntBASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 MIR1233-1-201ENST00000408722 82 ntBASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 SPDYE21P-201ENST00000413323 827 ntBASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 AL591424.1-201ENST00000442569 1213 ntBASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.21■■□□□ 1.15
SH3TC1Q8TE82 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
SH3TC1Q8TE82 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
SH3TC1Q8TE82 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.2■■□□□ 1.15
SH3TC1Q8TE82 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SH3TC1Q8TE82 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 AC004817.3-201ENST00000602957 2129 ntBASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 PRYP5-201ENST00000451909 266 ntBASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 UNC93B6-202ENST00000528242 690 ntBASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3TC1Q8TE82 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 AC009113.1-201ENST00000570267 2443 ntBASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 KRT18P27-201ENST00000427733 1299 ntBASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 AL096828.2-201ENST00000567259 1965 ntBASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 AC090164.3-201ENST00000610780 2143 ntBASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3TC1Q8TE82 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3TC1Q8TE82 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms