Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 KRT16P5-201ENST00000455284 522 ntBASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 AL138781.1-201ENST00000566567 1274 ntBASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 MTDHP1-201ENST00000605323 784 ntBASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH3Q8TBE1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC008040.2-201ENST00000461049 708 ntBASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC092666.2-201ENST00000613287 246 ntBASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AL109923.1-201ENST00000618799 583 ntBASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 OR6D1P-203ENST00000641209 4860 ntBASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CNIH3Q8TBE1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 NIFKP9-201ENST00000419265 221 ntBASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 AC011298.2-201ENST00000617989 482 ntBASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 HLA-J-201ENST00000462773 1622 ntBASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH3Q8TBE1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms