Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.97■□□□□ 0.63
UBA3Q8TBC4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBA3Q8TBC4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 KRT18P55-202ENST00000578578 1546 ntBASIC18.96■□□□□ 0.63
UBA3Q8TBC4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 TPSP2-201ENST00000561760 610 ntBASIC18.96■□□□□ 0.63
UBA3Q8TBC4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 AC011840.4-201ENST00000578471 627 ntBASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBA3Q8TBC4 AC012317.2-201ENST00000623305 2251 ntBASIC18.95■□□□□ 0.62
UBA3Q8TBC4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 ATP5G2P1-201ENST00000433580 426 ntBASIC18.95■□□□□ 0.62
UBA3Q8TBC4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA3Q8TBC4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA3Q8TBC4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms