Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AP001160.2-201ENST00000596071 487 ntBASIC13.88□□□□□ -0.19
LINC01006Q8NI28 MTDHP5-201ENST00000598980 586 ntBASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AL589182.2-201ENST00000619332 1049 ntBASIC13.88□□□□□ -0.19
LINC01006Q8NI28 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01006Q8NI28 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 AL020989.1-201ENST00000422979 469 ntBASIC13.87□□□□□ -0.19
LINC01006Q8NI28 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 AC004967.1-201ENST00000453589 447 ntBASIC13.87□□□□□ -0.19
LINC01006Q8NI28 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 AC064836.3-201ENST00000607928 673 ntBASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01006Q8NI28 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC01006Q8NI28 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms