Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CNEP1R1Q8N9A8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
CNEP1R1Q8N9A8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CNEP1R1Q8N9A8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 AL121912.1-201ENST00000603683 238 ntBASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 REXO1L6P-202ENST00000619970 1078 ntBASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNEP1R1Q8N9A8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AKR1C7P-201ENST00000305623 895 ntBASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AL160237.2-201ENST00000556165 472 ntBASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 AL138831.2-201ENST00000606564 490 ntBASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNEP1R1Q8N9A8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 AC125634.1-201ENST00000438758 1403 ntBASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 AC132008.2-207ENST00000454517 770 ntBASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 AC009078.2-202ENST00000463353 338 ntBASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNEP1R1Q8N9A8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms