Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC104076.2-201ENST00000448912 469 ntBASIC17.53■□□□□ 0.4
CPSF7Q8N684 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 AC036111.1-201ENST00000533973 1582 ntBASIC17.53■□□□□ 0.4
CPSF7Q8N684 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 AC133963.1-201ENST00000504166 1679 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 AL139384.1-201ENST00000612143 3047 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 LINC01126-201ENST00000623515 1646 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 SLC25A1P2-201ENST00000430693 912 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPSF7Q8N684 DUX4L26-201ENST00000489078 1255 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 AC006011.2-201ENST00000621313 1158 ntBASIC17.52■□□□□ 0.4
CPSF7Q8N684 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPSF7Q8N684 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPSF7Q8N684 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPSF7Q8N684 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CPSF7Q8N684 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 HMGA1P5-201ENST00000412453 271 ntBASIC17.51■□□□□ 0.39
CPSF7Q8N684 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPSF7Q8N684 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 AC011676.5-201ENST00000624864 2660 ntBASIC17.51■□□□□ 0.39
CPSF7Q8N684 AC099343.3-201ENST00000605834 2503 ntBASIC17.51■□□□□ 0.39
CPSF7Q8N684 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CPSF7Q8N684 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPSF7Q8N684 AC007663.1-201ENST00000438948 1240 ntBASIC17.5■□□□□ 0.39
CPSF7Q8N684 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPSF7Q8N684 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms