Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 VENTXP5-201ENST00000523979 775 ntBASIC17.32■□□□□ 0.36
KRT78Q8N1N4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 LETM1P2-201ENST00000597330 2178 ntBASIC17.32■□□□□ 0.36
KRT78Q8N1N4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT78Q8N1N4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 AC083849.1-201ENST00000615227 514 ntBASIC17.31■□□□□ 0.36
KRT78Q8N1N4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.31■□□□□ 0.36
KRT78Q8N1N4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 NFIC-211ENST00000641145 8399 ntBASIC17.31■□□□□ 0.36
KRT78Q8N1N4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KRT78Q8N1N4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AL353692.3-201ENST00000407031 1396 ntBASIC17.3■□□□□ 0.36
KRT78Q8N1N4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AC005332.3-201ENST00000589904 676 ntBASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AC009154.2-201ENST00000621177 724 ntBASIC17.3■□□□□ 0.36
KRT78Q8N1N4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT78Q8N1N4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT78Q8N1N4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms