Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 EGLN1P1-201ENST00000531623 762 ntBASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AC104390.1-201ENST00000555663 520 ntBASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.56□□□□□ -0.56
MRPL55Q7Z7F7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 TSPY14P-201ENST00000303979 915 ntBASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.55□□□□□ -0.56
MRPL55Q7Z7F7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms