Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 TFAMP1-201ENST00000412727 736 ntBASIC14.99□□□□□ -0.01
CSMD2Q7Z408 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 AC100803.2-201ENST00000562459 1963 ntBASIC14.99□□□□□ -0.01
CSMD2Q7Z408 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 KRT8P47-201ENST00000604727 1398 ntBASIC14.99□□□□□ -0.01
CSMD2Q7Z408 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD2Q7Z408 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 FAM58DP-201ENST00000428076 619 ntBASIC14.98□□□□□ -0.01
CSMD2Q7Z408 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AC009093.7-201ENST00000623853 1223 ntBASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AL132655.2-201ENST00000596276 594 ntBASIC14.98□□□□□ -0.01
CSMD2Q7Z408 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 AC004449.1-201ENST00000564240 433 ntBASIC14.98□□□□□ -0.01
CSMD2Q7Z408 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 NCF1C-201ENST00000438382 1427 ntBASIC14.98□□□□□ -0.01
CSMD2Q7Z408 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD2Q7Z408 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 MRPS18AP1-201ENST00000414458 589 ntBASIC14.97□□□□□ -0.01
CSMD2Q7Z408 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.97□□□□□ -0.01
CSMD2Q7Z408 AC004790.2-201ENST00000623588 572 ntBASIC14.97□□□□□ -0.01
CSMD2Q7Z408 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.96□□□□□ -0.01
CSMD2Q7Z408 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms