Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP31Q70CQ4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP31Q70CQ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
USP31Q70CQ4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.83■■□□□ 1.41
USP31Q70CQ4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.83■■□□□ 1.41
USP31Q70CQ4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.83■■□□□ 1.41
USP31Q70CQ4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP31Q70CQ4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP31Q70CQ4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 AC109462.3-201ENST00000573934 613 ntBASIC23.82■■□□□ 1.4
USP31Q70CQ4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 AC135776.1-201ENST00000319817 2481 ntBASIC23.82■■□□□ 1.4
USP31Q70CQ4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP31Q70CQ4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 AC002310.6-201ENST00000624451 1377 ntBASIC23.82■■□□□ 1.4
USP31Q70CQ4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.82■■□□□ 1.4
USP31Q70CQ4 BX276092.7-203ENST00000637198 1536 ntBASIC23.82■■□□□ 1.4
USP31Q70CQ4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 PRSS29P-201ENST00000440800 595 ntBASIC23.81■■□□□ 1.4
USP31Q70CQ4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 MIR3687-2-201ENST00000577708 61 ntBASIC23.81■■□□□ 1.4
USP31Q70CQ4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 MIR3687-1-201ENST00000614492 61 ntBASIC23.81■■□□□ 1.4
USP31Q70CQ4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.81■■□□□ 1.4
USP31Q70CQ4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP31Q70CQ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.8■■□□□ 1.4
USP31Q70CQ4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.8■■□□□ 1.4
USP31Q70CQ4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP31Q70CQ4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP31Q70CQ4 IGLL3P-201ENST00000412472 434 ntBASIC23.79■■□□□ 1.4
USP31Q70CQ4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 VN2R19P-201ENST00000442399 1052 ntBASIC23.79■■□□□ 1.4
USP31Q70CQ4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP31Q70CQ4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP31Q70CQ4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
USP31Q70CQ4 GPR89P-201ENST00000407924 1495 ntBASIC23.79■■□□□ 1.4
USP31Q70CQ4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP31Q70CQ4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms