Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PACS1Q6VY07 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PACS1Q6VY07 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PACS1Q6VY07 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PACS1Q6VY07 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.11■□□□□ 0.49
PACS1Q6VY07 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 AC106820.2-201ENST00000563775 3264 ntBASIC18.1■□□□□ 0.49
PACS1Q6VY07 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 AC108860.2-201ENST00000562760 2183 ntBASIC18.1■□□□□ 0.49
PACS1Q6VY07 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PACS1Q6VY07 AC141586.5-201ENST00000624546 2050 ntBASIC18.1■□□□□ 0.49
PACS1Q6VY07 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
PACS1Q6VY07 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 AC063952.2-201ENST00000498792 1227 ntBASIC18.09■□□□□ 0.49
PACS1Q6VY07 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 AC008687.5-201ENST00000593746 558 ntBASIC18.09■□□□□ 0.49
PACS1Q6VY07 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 AC100803.2-201ENST00000562459 1963 ntBASIC18.09■□□□□ 0.49
PACS1Q6VY07 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
PACS1Q6VY07 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PACS1Q6VY07 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.49
PACS1Q6VY07 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PACS1Q6VY07 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PACS1Q6VY07 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PACS1Q6VY07 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PACS1Q6VY07 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms