Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 Z83836.1-201ENST00000624605 1642 ntBASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 RN7SL606P-201ENST00000472779 293 ntBASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 AC022616.7-201ENST00000525383 220 ntBASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR2Q6PJQ5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 PRORSD1P-202ENST00000563365 2154 ntBASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 CROCCP2-202ENST00000412962 2773 ntBASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXR2Q6PJQ5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 LINC01238-205ENST00000567549 1107 ntBASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXR2Q6PJQ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXR2Q6PJQ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms